Jonatha M. Gott, Ph.D.

Associate Professor

Center for RNA Molecular Biology

Publication List

Solicited book:

Gott, J.M., editor (2004)
RNA Interference, Editing, and Modification: Methods and Protocols.
Humana Press, Totowa, NJ.

Solicited reviews and book chapters:

Gott, J.M. (2003)
Two distinct roles for terminal uridylyl transferases in RNA editing.
Proc Natl Acad Sci USA 100, 10583-10584.

Gott, J.M. (2003)
Expanding genome capacity via RNA editing.
Comptes Rendus Biologies 326, 901-908.

Gott, J.M. (2003)
RNA editing and human disorders.
In “Encyclopedia of the Human Genome”, Nature Publishing Group, London.

Gott, J.M. and Nilsen, T.W. (2002)
RNA processing in parasitic organisms: Trans-splicing and RNA editing.
In “Molecular and Biochemical Parasitology”, (ed. T.W. Nilsen) Academic Press, pp. 29-45.

Gott, J.M. (2001)
RNA editing in Physarum polycephalum.
In “RNA Editing: Frontiers in Molecular Biology”, pp. 20-37, (ed. B.L. Bass) Oxford University Press, Oxford.

Gott, J.M. and Emeson, R.B. (2000)
Functions and Mechanisms of RNA editing.
In “Annual Review of Genetics 34”, 499-531.

Gott, J.M. and Visomirski-Robic, L.M. (1998)
RNA editing in Physarum mitochondria.
In “Modification and Editing of RNA”, pp. 395-411, (eds. H. Grosjean and R. Benne), ASM Press, Washington, D.C..

Smith, H.C, Gott, J.M., and Hanson, M.R. (1997)
A guide to RNA editing.
RNA 3, 1105-1123.

Gott, J.M. (1994)
In vitro labelling of T4 introns.
In “The Molecular Biology of Bacteriophage T4”, (ed. J.D. Karam), American Society for Microbiology, Washington, DC p.472.

Witherell, G.W., Gott, J.M. and Uhlenbeck, O.C. (1991)
The specific interaction between RNA phage coat proteins and RNA.
In “Prog Nuc Acid Res Molec Biol 40”, pp. 185-220, (eds. W.E. Cohn and K. Moldave), Academic Press, San Diego.

Goodrich, H.A., Gott, J.M., Xu, M-Q., Scarlato, V., and Shub, D.A. (1989)
A group I intron in Bacillus subtilis bacteriophage SP01.
In “Molecular Biology of RNA”, pp. 59-66, (ed. T.R. Cech), Alan R. Liss, Inc., New York.

Shub, D.A., Xu, M-Q., Gott, J.M., Zeeh, A., and Wilson, L.D. (1987)
A family of autocatalytic group I introns in bacteriophage T4.
CSH Symp Quant Biol 52, 193-200.

Belfort, M., Pedersen-Lane, J., Ehrenman, K., Hall, D.H., Povinelli, C.M., Gott, J.M., and Shub, D.A. (1987)
Processing and genetic characterization of self-splicing introns of bacteriophage T4.
In “The Molecular Biology of RNA: New Perspectives”, pp. 45-66, (eds. M. Inouye and B.S. Dudock), Academic Press, San Diego.

Research publications:

Gott, J.M., Parimi, N. and Bundschuh, R. (2005)
Discovery of new genes and deletion editing in Physarum mitochondria enabled by a novel algorithm for finding edited mRNAs.
Acids Res. 33, 5063-5072.

Byrne, E.M. and Gott, J.M. (2004)
Unexpectly complex editing site patterns at dinucleotide insertion sites in Physarum mitochondria.
Mol.Cell Biol. 24, 7821-7828.

Byrne, E.M., Stout, A. and Gott, J.M. (2002)
Editing site recognition and nucleotide insertion are separable processes in Physarum mitochondria.
EMBO J 21, 6154-6161.

Byrne, E.M. and Gott, J.M. (2002)
Co-transcriptional editing of Physarum mitochondrial RNA requires local features of the native template.
RNA 8, 1174-1185.

Cheng, Y.-W., Visomirski-Robic, L.M. and Gott, J.M. (2001)
Non-templated addition of nucleotides to the 3' end of nascent RNA during RNA editing in Physarum.
EMBO J 20, 1405-1414.

Cheng, Y.-W. and Gott, J.M. (2000)
Transcription and RNA editing in a soluble in vitro system from Physarum mitochondria.
Nucl. Acids Res. 28, 1-7.

Visomirski-Robic, L.M. and Gott, J.M. (1997)
Insertional editing in isolated Physarum mitochondria is linked to RNA synthesis.
RNA 3, 821-837.

Visomirski-Robic, L.M. and Gott, J.M. (1997)
Insertional editing of nascent mitochondrial RNAs in Physarum.
Proc Natl Acad Sci USA 94, 4324-4329.

Visomirski-Robic, L.M. and Gott, J.M. (1995)
Accurate and efficient insertional RNA editing in isolated Physarum mitochondria.
RNA 1, 681-691.

Rundquist, B.A. and Gott, J.M. (1995)
RNA editing of the coI mRNA throughout the life cycle of Physarum polycephalum.
Molec. Gen. Genetics 247, 306-311.

Borer, P.N., Lin, Y., Wang, S., Roggenbuck, M.W., Gott, J.M.M, Uhlenbeck, O.C., and Pelczer, I. (1995)
Proton NMR and structural features of a 24-nucleotide RNA hairpin.
Biochemistry 34, 6488-6503.

Gott, J.M., Visomirski, L., and Hunter, J. (1993)
Insertional and substitutional RNA editing of the cytochrome c oxidase subunit 1 mRNA of Physarum polycephalum.
J. Biol. Chem. 268, 25483-25486.

Gott, J.M., Pan, T., LeCuyer, K. A. and Uhlenbeck, O.C. (1993)
Using circular permutation analysis to redefine the R17 coat protein binding site.
Biochemistry 32, 13399-13404.

Gott, J.M., Wilhelm, L., and Uhlenbeck, O.C. (1991)
RNA binding properties of the coat protein from bacteriophage GA.
Nucl. Acids Res. 19, 6499-6503.

Gott, J.M., Willis, M., Koch, T., and Uhlenbeck, O.C. (1991)
A specific, UV-induced RNA-protein crosslink using 5-bromouridine-substituted RNA.
Biochemistry 30, 6290-6295.

Goodrich-Blair, H.A., Scarlato, V., Gott, J.M., Xu, M-Q., and Shub, D.A. (1990)
A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SP01.
Cell 63, 417-424.

Shub, D.A., Gott, J.M., Xu, M-Q., Lang, B.F., Michel, F., Tomaschewski, J., Pedersen-Lane, J., and Belfort, M. (1988)
Structural conservation among three homologous introns of bacteriophage T4 and the group I introns of eukaryotes.
Proc Natl Acad Sci USA 85, 1151-1155.

Gott, J.M., Zeeh, A., Bell-Pedersen, D., Ehrenman, K., Belfort, M., and Shub, D.A. (1988)
Genes within genes: independent expression of phage T4 intron open reading frames and the genes in which they reside.
Genes & Devel 2, 1791-1799.

Gott, J.M., Shub, D.A., and Belfort, M. (1986)
Multiple self-splicing introns in bacteriophage T4: evidence from autocatalytic GTP labeling of RNA in vitro.
Cell 47, 81-87.